Install error

[pgormley]

I've installed cget and cmake but when trying to install with bash install.sh I get the errors below. (My system is CentOS Linux release 7.6.1810).

Installing Dependencies - Libstatgen ...
Generating MakeFiles ...
CMake Error at /SFS/product/cmake/3.5.2/rh63_x86_64/share/cmake-3.5/Modules/CMakeDetermineSystem.cmake:104 (message):
  Could not find toolchain file: ../cget/cget/cget.cmake
Call Stack (most recent call first):
  CMakeLists.txt:2 (project)


CMake Error: CMAKE_C_COMPILER not set, after EnableLanguage
CMake Error: CMAKE_CXX_COMPILER not set, after EnableLanguage
-- Configuring incomplete, errors occurred!
make: *** No targets specified and no makefile found.  Stop.
Binary created at /release-build/DosageConvertor

Any ideas or could you provide a binary?

[pgormley]

Similar issue on MacOS:

Installing Dependencies - Libstatgen ...
Generating MakeFiles ...
CMake Error at /usr/local/Cellar/cmake/3.15.2/share/cmake/Modules/CMakeDetermineSystem.cmake:99 (message):
  Could not find toolchain file: ../cget/cget/cget.cmake
Call Stack (most recent call first):
  CMakeLists.txt:2 (project)


CMake Error: CMake was unable to find a build program corresponding to "Unix Makefiles".  CMAKE_MAKE_PROGRAM is not set.  You probably need to select a different build tool.
CMake Error: CMAKE_C_COMPILER not set, after EnableLanguage
CMake Error: CMAKE_CXX_COMPILER not set, after EnableLanguage
-- Configuring incomplete, errors occurred!
make: *** No targets specified and no makefile found.  Stop.
Binary created at /release-build/DosageConvertor

[Yatros]

Hello,

I'm having same issue in macOS High Sierra 10.13.6

Installing Dependencies - Libstatgen ...
Generating MakeFiles ...
CMake Error at /usr/local/Cellar/cmake/3.15.2/share/cmake/Modules/CMakeDetermineSystem.cmake:99 (message):
  Could not find toolchain file: ../cget/cget/cget.cmake
Call Stack (most recent call first):
  CMakeLists.txt:2 (project)


CMake Error: CMake was unable to find a build program corresponding to "Unix Makefiles".  CMAKE_MAKE_PROGRAM is not set.  You probably need to select a different build tool.
CMake Error: CMAKE_C_COMPILER not set, after EnableLanguage
CMake Error: CMAKE_CXX_COMPILER not set, after EnableLanguage
-- Configuring incomplete, errors occurred!
make: *** No targets specified and no makefile found.  Stop.
Binary created at /release-build/DosageConvertor

[jonathonl]

The installation of libStatGen is failing. The error messages would be hidden away in install.log.

[zulfanz]

I experienced same problem with @jonathonl . Failed to install libStatGen.

[jonathonl]

Can you provide more detail on the error messages you are receiving @zulfanz?

[zulfanz]

$ bash install.sh
Installing Dependencies - Libstatgen ...
Downloading https://github.com/statgen/libStatGen/archive/HEAD.tar.gz
[######################################################################] 100%
Extracting archive /home/zulfan/Documents/shared/DosageConvertor/cget/cget/build/tmp-a5ceefea115f44988d96a6cc2ef689a4/HEAD.tar.gz ...
Unexpected error: <type 'exceptions.OSError'>
[Errno 1] Operation not permitted
Failed to build package statgen/libStatGen
Failed Installing Dependencies - Libstatgen

I am new to Linux. Could you help me to solve this?

[jonathonl]

Are you trying to install into a directory for which you do not have write permissions? Does running touch test_file.txt fail?