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docker-compose-local-1.yml
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docker-compose-local-1.yml
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version: '3.8'
services:
sigdep3:
image: partnersinhealth/openmrs-server:latest
restart: unless-stopped
depends_on:
sigdep-db:
condition: service_healthy
container_name: sigdep3
hostname: sigdep3
healthcheck:
test:
- CMD
- curl
- "-f"
- "http://localhost:8080/openmrs/"
timeout: 5s
environment:
OMRS_CONFIG_CONNECTION_SERVER: "sigdep-db"
OMRS_CONFIG_CONNECTION_ROOT_PASSWORD: "root"
OMRS_CONFIG_CONNECTION_USERNAME: "root"
OMRS_CONFIG_CONNECTION_PASSWORD: "root"
OMRS_CONFIG_CONNECTION_EXTRA_ARGS: "&autoReconnect=true&sessionVariables=default_storage_engine%3DInnoDB&useUnicode=true&characterEncoding=UTF-8&useSSL=false&requireSSL=false"
OMRS_CONFIG_AUTO_UPDATE_DATABASE: "false"
OMRS_CONFIG_CREATE_TABLES: "false"
OMRS_CONFIG_HAS_CURRENT_OPENMRS_DATABASE: "true"
OMRS_DEV_DEBUG_PORT: "1044"
CLIENTREGISTRY_SERVERURL: ${CLIENTREGISTRY_SERVERURL}
CLIENTREGISTRY_USERNAME: ${CLIENTREGISTRY_USERNAME}
CLIENTREGISTRY_PASSWORD: ${CLIENTREGISTRY_PASSWORD}
CLIENTREGISTRY_IDENTIFIERROOT: ${CLIENTREGISTRY_IDENTIFIERROOT}
ports:
- "8080:8080"
- "1044:1044"
volumes:
- ./configs/sigdep3/distribution:/openmrs/distribution
# uncomment to persist the volumes on the Host file system
#- .data/sigdep3:/openmrs/data
networks:
- hie
labels:
- 'traefik.enable=true'
- 'traefik.docker.network=sigdep3_hie'
- 'traefik.http.services.sigdep3.loadbalancer.server.port=8080'
- 'traefik.http.services.sigdep3.loadbalancer.server.scheme=http'
- 'traefik.http.routers.sigdep3.service=sigdep3'
- 'traefik.http.routers.sigdep3.tls=true'
- 'traefik.http.routers.sigdep3.entrypoints=web-secure'
- 'traefik.http.routers.sigdep3.rule=Host(`test2.cihis.org`) && PathPrefix(`/openmrs`)'
sigdep-db:
image: library/mysql:5.6
restart: unless-stopped
hostname: sigdep-db
container_name: sigdep-db
command: "mysqld \
--character-set-server=utf8 \
--collation-server=utf8_general_ci \
--max_allowed_packet=1G \
--default-authentication-plugin=mysql_native_password \
--sql_mode=STRICT_TRANS_TABLES,NO_ZERO_IN_DATE,NO_ZERO_DATE,ERROR_FOR_DIVISION_BY_ZERO,NO_ENGINE_SUBSTITUTION"
environment:
MYSQL_DATABASE: "openmrs"
MYSQL_ROOT_PASSWORD: "root"
healthcheck:
test: [ "CMD", "mysqladmin" ,"ping", "-h", "localhost" ]
timeout: 20s
retries: 10
depends_on:
openhim-core:
condition: service_healthy
ports:
- "3307:3306"
volumes:
- ./configs/sigdep3/mysql.cnf:/etc/mysql/conf.d/custom.cnf # mysql config preconfigured to allow binlog/debezium
- ./configs/sigdep3/init-db:/docker-entrypoint-initdb.d
# uncomment to persist the volumes on the Host file system
#- .db/sigdep3:/var/lib/mysql
networks:
- hie
#OpenHIM -IOL
mongo:
container_name: openhim-mongo
ports:
- "27018:27017"
image: mongo:3.4
networks:
- hie
openhim-core:
container_name: openhim-core
image: jembi/openhim-core:v7.1.0
restart: unless-stopped
environment:
- mongo_url=mongodb://mongo/openhim
- mongo_atnaUrl=mongodb://mongo/openhim
healthcheck:
test: "node /healthcheck.js"
interval: 20s
timeout: 20s
retries: 2
volumes:
- ./configs/openhim/healthcheck.js:/healthcheck.js
depends_on:
- mongo
ports:
- "8085:8080"
- "5000:5000"
- "5001:5001"
- "5050:5050"
- "5051:5051"
- "5052:5052"
- "7788:7788"
networks:
- hie
labels:
- 'traefik.enable=true'
- 'traefik.docker.network=sigdep3_hie'
- 'traefik.http.services.openhim-api.loadbalancer.server.port=8080'
- 'traefik.http.services.openhim-api.loadbalancer.server.scheme=https'
- 'traefik.http.routers.openhim-api.service=openhim-api'
- 'traefik.http.routers.openhim-api.tls=true'
- 'traefik.http.routers.openhim-api.entrypoints=web-secure'
- 'traefik.http.routers.openhim-api.rule=Host(`test2.cihis.org`) && PathPrefix(`/openhimcomms`)'
- 'traefik.http.routers.openhim-api.middlewares=openhim-api'
- 'traefik.http.middlewares.openhim-api.stripprefix.prefixes=/openhimcomms'
- 'traefik.http.middlewares.openhim-api.stripprefix.forceSlash=false'
- 'traefik.http.services.openhim-ssl.loadbalancer.server.port=5000'
- 'traefik.http.services.openhim-ssl.loadbalancer.server.scheme=https'
- 'traefik.http.routers.openhim-ssl.service=openhim-ssl'
- 'traefik.http.routers.openhim-ssl.tls=true'
- 'traefik.http.routers.openhim-ssl.entrypoints=web-secure'
- 'traefik.http.routers.openhim-ssl.rule=Host(`test2.cihis.org`) && PathPrefix(`/openhimcore`)'
- 'traefik.http.routers.openhim-ssl.middlewares=openhim-ssl'
- 'traefik.http.middlewares.openhim-ssl.stripprefix.prefixes=/openhimcore'
- 'traefik.http.middlewares.openhim-ssl.stripprefix.forceSlash=false'
openhim-console:
container_name: openhim-console
image: jembi/openhim-console:v1.15.0
volumes:
- ./configs/openhim-console/default-local.json:/usr/share/nginx/html/config/default.json
healthcheck:
test: "curl -sS http://openhim-console || exit 1"
interval: 10s
timeout: 60s
retries: 3
ports:
- "9000:80"
labels:
- 'traefik.enable=true'
- 'traefik.docker.network=sigdep3_hie'
- 'traefik.http.services.openhim-console.loadbalancer.server.port=80'
- 'traefik.http.services.openhim-console.loadbalancer.server.scheme=http'
- 'traefik.http.routers.openhim-console.service=openhim-console'
- 'traefik.http.routers.openhim-console.tls=true'
- 'traefik.http.routers.openhim-console.entrypoints=web-secure'
- 'traefik.http.routers.openhim-console.rule=Host(`test2.cihis.org`)'
networks:
- hie
# Loads Default OpenHIM Config
openhim-config:
container_name: openhim-config
image: ghcr.io/i-tech-uw/openhim-config:v0.0.0
volumes:
- ./configs/openhim/test-openhim-config.json:/app/test-openhim-config.json
networks:
- hie
###
# OpenCR - Client Registry
###
opencr:
container_name: opencr
hostname: opencr
image: intrahealth/opencr:latest
restart: unless-stopped
environment:
- NODE_ENV=docker
- HAPI_FHIR_URL=http://opencr-fhir:8080/fhir/metadata
volumes:
- ./configs/opencr/config.json:/src/server/config/config_docker.json
- ./configs/opencr/mediator.json:/src/server/config/mediator.json
- ./configs/opencr/decisionRules.json:/src/server/config/decisionRules.json
- ./configs/opencr/PatientRelationship.json:/src/resources/Relationships/PatientRelationship.json
depends_on:
- opencr-fhir
labels:
- 'traefik.enable=true'
- 'traefik.docker.network=sigdep3_hie'
- 'traefik.http.routers.opencr.tls=true'
- 'traefik.http.routers.opencr.entrypoints=web-secure'
- 'traefik.http.services.opencr.loadbalancer.server.port=3000'
- 'traefik.http.routers.opencr.rule=Host(`test2.cihis.org`) && PathPrefix(`/crux`) || PathPrefix(`/ocrux`)'
- 'traefik.http.services.opencr.loadbalancer.server.scheme=http'
- 'traefik.http.routers.opencr.service=opencr'
networks:
- hie
ports:
- 3000:3000
opencr-fhir:
image: hapiproject/hapi:v5.5.1
container_name: opencr-fhir
hostname: opencr-fhir
restart: unless-stopped
healthcheck:
test: "curl -sS http://opencr-fhir:8080/fhir/metadata || exit 1"
interval: 90s
timeout: 30s
retries: 3
volumes:
- /data/hapi
# - ./configs/opencr/application.yml:/data/hapi/application.yaml
ports:
- 8081:8080
# env_file:
# - ./configs/opencr/.env
# environment:
# SPRING_CONFIG_LOCATION: 'file:///data/hapi/application.yaml'
networks:
- hie
es:
container_name: es
hostname: es
image: intrahealth/elasticsearch:latest
restart: unless-stopped
environment:
- xpack.security.enabled=false
- discovery.type=single-node
ulimits:
nofile:
soft: 65536
hard: 65536
volumes:
- /usr/share/elasticsearch/data
- ./esplugin/string-similarity:/usr/share/elasticsearch/plugins/string-similarity-scoring
healthcheck:
test: "curl --silent --fail http://es:9200/_cluster/health || exit 1"
networks:
- hie
# Hapi-FHIR - SHR
shr-hapi-fhir:
container_name: shr-hapi-fhir
image: hapiproject/hapi:v5.5.1
restart: always
environment:
- spring.datasource.url=jdbc:postgresql://db/hapi?targetServerType=primary
- spring.datasource.username=admin
- spring.datasource.password=admin
- spring.datasource.driverClassName=org.postgresql.Driver
- spring.jpa.properties.hibernate.dialect=org.hibernate.dialect.PostgreSQL95Dialect
- spring.datasource.hikari.minimumIdle=20
- spring.datasource.hikari.connectionTimeout=60000
- spring.datasource.hikari.idleTimeout=600000
- hapi.fhir.allow_external_references=true
- hapi.fhir.bulk_export_enabled=true
- hapi.fhir.enable_repository_validating_interceptor=true
- hapi.fhir.auto_create_placeholder_reference_targets=true
depends_on:
- db
labels:
- 'traefik.enable=true'
- 'traefik.docker.network=sigdep3_hie'
- 'traefik.http.routers.shr-hapi-fhir.tls=true'
- 'traefik.http.routers.shr-hapi-fhir.entrypoints=web-secure'
- 'traefik.http.services.shr-hapi-fhir.loadbalancer.server.port=8080'
- 'traefik.http.routers.shr-hapi-fhir.rule=Host(`test2.cihis.org`) && PathPrefix(`/fhir`)'
- 'traefik.http.services.shr-hapi-fhir.loadbalancer.server.scheme=http'
- 'traefik.http.routers.shr-hapi-fhir.service=shr-hapi-fhir'
networks:
- hie
ports:
- 8888:8080
# Streaming Pipeline
streaming-pipeline:
image: openmrsinfra/openmrs-fhir-analytics:plir-binlog
container_name: streaming-pipeline
healthcheck:
test: "exit 0"
depends_on:
sigdep3:
condition: service_healthy
volumes:
- ./configs/streaming-pipeline/config.json:/deployments/config.json
# data is the directory which you want to persist the generated parquet files
# - ./configs/streaming-pipeline/parquet:/tmp
environment:
- OPENMRS_URL=http://sigdep3:8080/openmrs
- OPENMRS_USERNAME=admin
- OPENMRS_PASSWORD=Admin123
- SINK_URL=http://openhim-core:5001/fhir/
- SINK_USERNAME=dbezium
- SINK_PASSWORD=dbezium
- JDBC_FETCH_SIZE=10000
- JDBC_MAX_POOL_SIZE=50
- JDBC_INITIAL_POOL_SIZE=10
- JDBC_DRIVER_CLASS=com.mysql.cj.jdbc.Driver
- JDBC_URL=jdbc:mysql://sigdep-db:3306/openmrs
# the 2 variable below should be same as volume mappings above
#- PARQUET_PATH=
- FHIR_DEBEZIUM_CONFIG_PATH=/deployments/config.json
networks:
- hie
#DB for HAPI FHIR for SHR
db:
image: postgres:9.5
restart: always
environment:
POSTGRES_PASSWORD: admin
POSTGRES_USER: admin
POSTGRES_DB: hapi
volumes:
- /var/lib/postgresql/data
- ./init-scripts:/docker-entrypoint-initdb.d # Other dbs like opencr created via script
ports:
- "5432:5432"
networks:
- hie
secrets:
datasource.password:
file: ./configs/openelis/properties/datasource.password
common.properties:
file: ./configs/openelis/properties/common.properties
volumes:
db-data:
key_trust-store-volume:
certs-vol:
certs:
keys-vol:
networks:
hie: