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Is your feature request related to a problem? Please describe.
For segmentation models, Radiologist are interested in finding the size of the tumors. The transform should calculate the number of pixels for each label and multiple it by the voxel size.
voxel size= pixel xy spacing ^2 X slice thickness
Describe the solution you'd like
Would like a transform to give back the tumor or tumors and their sizes as
spleen =1 connected components, pixel count = 200, size 500 ml
Liver tumors = 3 with sizes=100, 150, 50 ml
Describe alternatives you've considered
I manually have function calls to do connected components for certain labels then calculate the tumor size
one suggestion from @YanxuanLiu was to do it a lambda transform but it is missing the z dim
Additional context
The transform should work on each connected component for each label that is patient has 5 liver tumors and give the size of each tumor.
The text was updated successfully, but these errors were encountered:
Is your feature request related to a problem? Please describe.
For segmentation models, Radiologist are interested in finding the size of the tumors. The transform should calculate the number of pixels for each label and multiple it by the voxel size.
voxel size= pixel xy spacing ^2 X slice thickness
Describe the solution you'd like
Would like a transform to give back the tumor or tumors and their sizes as
spleen =1 connected components, pixel count = 200, size 500 ml
Liver tumors = 3 with sizes=100, 150, 50 ml
Describe alternatives you've considered
I manually have function calls to do connected components for certain labels then calculate the tumor size
one suggestion from @YanxuanLiu was to do it a lambda transform but it is missing the z dim
Additional context
The transform should work on each connected component for each label that is patient has 5 liver tumors and give the size of each tumor.
The text was updated successfully, but these errors were encountered: