R-CMD-check.yaml

# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
#
# NOTE: This workflow is overkill for most R packages and
# check-standard.yaml is likely a better choice.
# usethis::use_github_action("check-standard") will install it.
on:
  push:
    branches: [main, master]
  pull_request:
    branches: [main, master]

name: R-CMD-check

jobs:
  R-CMD-check:
    runs-on: ${{ matrix.config.os }}

    name: ${{ matrix.config.os }} (${{ matrix.config.r }})

    strategy:
      fail-fast: false
      matrix:
        config:
          - {os: macOS-latest,   r: 'release'}
          - {os: windows-latest, r: 'release'}
          - {os: windows-latest, r: '3.6'}
          # Deliberately check on older ubuntu to maximise backward compatibility
          - {os: ubuntu-18.04,   r: 'devel', http-user-agent: 'release'}
          - {os: ubuntu-18.04,   r: 'release'}

    env:
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
      R_KEEP_PKG_SOURCE: yes

    steps:
      - uses: actions/checkout@v2

      - uses: r-lib/actions/setup-pandoc@v2

      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: ${{ matrix.config.r }}
          http-user-agent: ${{ matrix.config.http-user-agent }}
          use-public-rspm: true

      - name: Install dependencies
        run: Rscript -e "install.packages('rcmdcheck')" -e "install.packages(c('MASS', 'assertthat', 'caret', 'knitr', 'rmarkdown', 'pacman', 'testthat' , 'magrittr', 'dplyr', 'igraph', 'nomnoml', 'webshot', 'htmlwidgets'))"

      - name: Install randomForest old
        if: "${{ matrix.config.r == '3.6'}}"
        run: |
          install.packages('remotes')
          remotes::install_version('randomForest', '4.6-14')
        shell: Rscript {0}

      - name: Install randomForest new
        if: "${{ matrix.config.r != '3.6'}}"
        run: |
          install.packages('randomForest')
        shell: Rscript {0}


      - name: Check
        env:
          _R_CHECK_CRAN_INCOMING_: false
        run: |
          options(crayon.enabled = TRUE)
          rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
        shell: Rscript {0}

      - name: Show testthat output
        if: always()
        run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true
        shell: bash

      - name: Upload check results
        if: failure()
        uses: actions/upload-artifact@main
        with:
          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
          path: check