From 21e9355d380bf50e00167b70d341cbc9b09bffbe Mon Sep 17 00:00:00 2001 From: William Rowell Date: Mon, 11 Nov 2024 11:15:11 -0800 Subject: [PATCH] updated version in docs --- README.md | 8 ++++---- image_manifest.txt | 2 +- wiki | 2 +- 3 files changed, 6 insertions(+), 6 deletions(-) diff --git a/README.md b/README.md index 7e500ca..a9c395c 100644 --- a/README.md +++ b/README.md @@ -24,18 +24,18 @@ Both workflows are designed to analyze human PacBio whole genome sequencing (WGS This is an actively developed workflow with multiple versioned releases, and we make use of git submodules for common tasks that are shared by multiple workflows. There are two ways to ensure you are using a supported release of the workflow and ensure that the submodules are correctly initialized: -1) Download the release zips directly from a [supported release](https://github.com/PacificBiosciences/HiFi-human-WGS-WDL/releases/tag/v2.0.0): +1) Download the release zips directly from a [supported release](https://github.com/PacificBiosciences/HiFi-human-WGS-WDL/releases/tag/v2.0.2): ```bash - wget https://github.com/PacificBiosciences/HiFi-human-WGS-WDL/releases/download/v2.0.0/hifi-human-wgs-singleton.zip - wget https://github.com/PacificBiosciences/HiFi-human-WGS-WDL/releases/download/v2.0.0/hifi-human-wgs-family.zip + wget https://github.com/PacificBiosciences/HiFi-human-WGS-WDL/releases/download/v2.0.2/hifi-human-wgs-singleton.zip + wget https://github.com/PacificBiosciences/HiFi-human-WGS-WDL/releases/download/v2.0.2/hifi-human-wgs-family.zip ``` 2) Clone the repository and initialize the submodules: ```bash git clone \ - --depth 1 --branch v2.0.0 \ + --depth 1 --branch v2.0.2 \ --recursive \ https://github.com/PacificBiosciences/HiFi-human-WGS-WDL.git ``` diff --git a/image_manifest.txt b/image_manifest.txt index 24b0f0a..4ac7240 100644 --- a/image_manifest.txt +++ b/image_manifest.txt @@ -11,7 +11,7 @@ quay.io/pacbio/pb_wdl_base@sha256:4b889a1f21a6a7fecf18820613cf610103966a93218de7 quay.io/pacbio/slivar@sha256:f71a27f756e2d69ec30949cbea97c54abbafde757562a98ef965f21a28aa8eaa quay.io/pacbio/svpack@sha256:628e9851e425ed8044a907d33de04043d1ef02d4d2b2667cf2e9a389bb011eba quay.io/pacbio/trgt@sha256:0284ff5756f8d47d9d81b515b8b1a6c81fac862ae5a7b4fe89f65235c3e5e0c9 -quay.io/pacbio/wgs_tertiary@sha256:128086b938d2602c06f4e5f88a8b7ead70933e3a43237e49cd505d141bb31785 +quay.io/pacbio/wgs_tertiary@sha256:410597030e0c85cf16eb27a877d260e7e2824747f5e8b05566a1aaa729d71136 google/deepvariant:1.6.1 google/deepvariant:1.6.1-gpu pgkb/pharmcat:2.15.4 diff --git a/wiki b/wiki index d7178d9..e8281ed 160000 --- a/wiki +++ b/wiki @@ -1 +1 @@ -Subproject commit d7178d9861078105947b5e8498ac59626986dc36 +Subproject commit e8281ed6931a4a7fe8a4b6121261d97d665a0076