Skip to content

Issues: MareesAT/GWA_tutorial

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

21 Open 3 Closed
21 Open 3 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Failed to select autosomal SNPs only (QC Step 3)
#25 opened Jan 9, 2024 by Franklin593
Some questions about qqplots
#24 opened Sep 9, 2023 by Isa0529
why individual 13291 NA07045 in 0.2_low_call_rate_pihat.txt
#23 opened Aug 21, 2023 by usernicai
1
I have failed convert vcf to Plink(v1.07) format
#20 opened Sep 14, 2022 by Wusun5
Failed to open snp_1_22.txt
#19 opened Jun 27, 2022 by TareqAldirawi
Error: 'legend' is of length 0
#18 opened May 9, 2022 by Adonyo-Emmanuel
3
ftp vs https in downloading 1000 genome vcf file in Step 2_Population_stratification
#17 opened Apr 13, 2022 by SarojaSomu
1
Permutation step, Error? or My fault?
#16 opened Mar 15, 2022 by zzjl20
How to Create HapMap_3_r3 ( bim, bed and fam )
#14 opened Feb 11, 2022 by Kiran936
1
data for 0.2_low_call_rate_pihat.txt
#13 opened Nov 18, 2021 by Manonanthini
2
Any plan to have an update to GWA_tutorial?
#12 opened Oct 8, 2021 by Shicheng-Guo
1
Quantitative phenotypes QC
#11 opened Aug 7, 2021 by elssam
Miss MDS_merge2.mds file
#10 opened Mar 23, 2021 by Mohammad-Vahed
1
Could you please tell me how to "inversion.txt" in the 1_QC_GWAS folder
#9 opened Feb 16, 2021 by 8865225
2
How to confirm which sub has the lower call rate of each pair that I should remove
#8 opened Nov 26, 2020 by tongwang-en
The system cannot find the path specified.
#7 opened Aug 13, 2020 by green-ear-rabbit
.vcf has fewer tokens than expected error
#5 opened Oct 18, 2019 by sererenaa
8
Can you explain more about the "inversion.txt" in the 1_QC_GWAS folder
#4 opened Oct 12, 2019 by ulysses1881826
8
p-value threshold for HWE deviation
#3 opened Oct 2, 2018 by blueskypie
1
controlling population stratification
#2 opened Oct 2, 2018 by blueskypie
1
convert vcf to plink step missing id setting
#1 opened Sep 7, 2018 by trptyrphe11
4
ProTip! Type g i on any issue or pull request to go back to the issue listing page.