From 3a338b4a0e54fe9095ca6f7b5bd4f6a9d7c4b603 Mon Sep 17 00:00:00 2001
From: Blampey Quentin <quentin.blampey@centralesupelec.fr>
Date: Wed, 22 May 2024 17:31:48 +0200
Subject: [PATCH] hotfix matplotlib get_cmap

---
 CHANGELOG.md                    | 4 ++++
 pyproject.toml                  | 2 +-
 scyan/plot/_scanpy_plot/umap.py | 3 +--
 3 files changed, 6 insertions(+), 3 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index a424ed8..2dd35f7 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,3 +1,7 @@
+## [1.6.2] - 2024-05-22
+
+Hotfix: use get_cmap from matplotlib.pyplot (#35)
+
 ## [1.6.1] - 2024-04-08
 
 Rename `correct_spillover` -> `compensate`
diff --git a/pyproject.toml b/pyproject.toml
index e9c40da..220d082 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "scyan"
-version = "1.6.1"
+version = "1.6.2"
 description = "Single-cell Cytometry Annotation Network"
 documentation = "https://mics-lab.github.io/scyan/"
 homepage = "https://mics-lab.github.io/scyan/"
diff --git a/scyan/plot/_scanpy_plot/umap.py b/scyan/plot/_scanpy_plot/umap.py
index ff2647a..f3e795a 100644
--- a/scyan/plot/_scanpy_plot/umap.py
+++ b/scyan/plot/_scanpy_plot/umap.py
@@ -16,7 +16,6 @@
 from matplotlib import pyplot as pl
 from matplotlib import rcParams
 from matplotlib.axes import Axes
-from matplotlib.cm import get_cmap
 from matplotlib.collections import PatchCollection
 from matplotlib.colors import Colormap, Normalize, is_color_like
 from matplotlib.figure import Figure
@@ -323,7 +322,7 @@ def scanpy_pl_umap(
             raise ValueError("Cannot specify both `color_map` and `cmap`.")
         else:
             cmap = color_map
-    cmap = copy(get_cmap(cmap))
+    cmap = copy(pl.get_cmap(cmap))
     cmap.set_bad(na_color)
     kwargs["cmap"] = cmap
     # Prevents warnings during legend creation