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Enable codon option in programmatic interface CI #225: Commit 5243352 pushed by TJBIII
February 6, 2024 23:03 1m 27s enable-codon-in-api-module
enable-codon-in-api-module
February 6, 2024 23:03 1m 27s
updated docs to reflect codon-based trimming option CI #224: Commit 1c30939 pushed by JLSteenwyk
February 6, 2024 17:30 2m 21s master
master
February 6, 2024 17:30 2m 21s
updated docs to reflect codon-based trimming option CI #223: Commit df840eb pushed by JLSteenwyk
February 6, 2024 17:26 2m 16s master
master
February 6, 2024 17:26 2m 16s
Finish codon-based trimming CI #222: Commit 5a18033 pushed by TJBIII
February 6, 2024 01:39 1m 58s master
master
February 6, 2024 01:39 1m 58s
initial commit of codon-based trimming CI #221: Commit b2bb0da pushed by JLSteenwyk
February 5, 2024 23:58 2m 26s codon_trimming
codon_trimming
February 5, 2024 23:58 2m 26s
fixed msa unit test CI #220: Commit de1855c pushed by JLSteenwyk
February 5, 2024 23:55 2m 34s codon_trimming
codon_trimming
February 5, 2024 23:55 2m 34s
fixed msa unit test CI #219: Commit de1855c pushed by JLSteenwyk
December 4, 2023 22:46 1m 46s master
master
December 4, 2023 22:46 1m 46s
fixed link to publication pdf CI #218: Commit 835677d pushed by JLSteenwyk
December 3, 2023 16:14 1m 43s master
master
December 3, 2023 16:14 1m 43s
Support site_positions_to_trim on MSA trim method CI #217: Commit f4cb92a pushed by JLSteenwyk
October 5, 2023 18:11 2m 42s v2.1.1
v2.1.1
October 5, 2023 18:11 2m 42s
Support site_positions_to_trim on MSA trim method CI #216: Commit f4cb92a pushed by TJBIII
October 2, 2023 23:50 2m 11s master
master
October 2, 2023 23:50 2m 11s
Merge pull request #37 from JLSteenwyk/np-refactor CI #215: Commit d1ff977 pushed by JLSteenwyk
September 24, 2023 20:49 3m 53s master
master
September 24, 2023 20:49 3m 53s
Run black formatter CI #214: Commit 6eabe7b pushed by TJBIII
September 24, 2023 20:42 4m 22s np-refactor
np-refactor
September 24, 2023 20:42 4m 22s
Remove unused helpers CI #213: Commit 59200e3 pushed by TJBIII
September 24, 2023 20:29 1m 52s np-refactor
np-refactor
September 24, 2023 20:29 1m 52s
Fix case for trimmed property when no positions to trim CI #212: Commit 905e560 pushed by TJBIII
September 24, 2023 20:04 2m 25s np-refactor
np-refactor
September 24, 2023 20:04 2m 25s
Remove old unit tests that are no longer relevant CI #211: Commit 8442f43 pushed by TJBIII
September 24, 2023 19:49 1m 29s np-refactor
np-refactor
September 24, 2023 19:49 1m 29s
Fix to_bio_msa to preserve full sequence descriptions CI #210: Commit 90e1dc7 pushed by TJBIII
September 24, 2023 19:43 1m 41s np-refactor
np-refactor
September 24, 2023 19:43 1m 41s
Move SiteClassificationType enum out of modes module and organize MSA… CI #209: Commit fda1408 pushed by TJBIII
September 24, 2023 00:19 1m 51s np-refactor
np-refactor
September 24, 2023 00:19 1m 51s
Fix integration tests for kpi_smart_gap_mode due to new gap chars logic CI #208: Commit 1ef9d9b pushed by TJBIII
September 18, 2023 22:39 3m 39s np-refactor
np-refactor
September 18, 2023 22:39 3m 39s
Harden MSA trimming CI #207: Commit 4a2a799 pushed by TJBIII
September 18, 2023 22:34 1m 38s np-refactor
np-refactor
September 18, 2023 22:34 1m 38s
finished writing logic of trimming modes CI #206: Commit 7c0dee8 pushed by JLSteenwyk
September 13, 2023 01:15 1m 53s numpy_accelerate
numpy_accelerate
September 13, 2023 01:15 1m 53s
start msa refactor with gappy and kpi modes CI #205: Commit 12a08e6 pushed by JLSteenwyk
September 12, 2023 01:41 2m 1s numpy_accelerate
numpy_accelerate
September 12, 2023 01:41 2m 1s
used numpy accelerate for smart gap determination CI #204: Commit bd24d59 pushed by JLSteenwyk
September 11, 2023 23:54 2m 17s numpy_accelerate
numpy_accelerate
September 11, 2023 23:54 2m 17s
added link to clipkit browser app in readme CI #203: Commit acb6a69 pushed by JLSteenwyk
August 8, 2023 13:28 6m 47s master
master
August 8, 2023 13:28 6m 47s