Releases: Eden-Kramer-Lab/loren_frank_data_processing
Releases · Eden-Kramer-Lab/loren_frank_data_processing
v0.5.4.dev0
- Add
turn
to the segments dataframe to capture whether the animal is turning right or left (0b0382a) - Change NaN for is_correct to False so that indexing with this field is easier (54ae16f)
- Don't backfill interpolated position because now time is evenly spaced (75824f5)
- Change failure to load file from error to warning in logger (89e0531)
- Add linear position as a field in position_info (d571a65)
v0.5.3.dev0
v0.5.2.dev0
- Fixes issue with
spike_indicator_dataframe
where the epoch key was not being passed to get the trial time.
v0.5.1.dev0
- Make failure to load LFP a warning (8e4b344)
- Change default
route_euclidean_distance_scaling
(bc19772) - Make default
max_distance_from_well
smaller (0512886) - Don't need to keep index in dataframe because pandas allows groupby in the index now (fe2664f)
- Fix LFP timestamps (0cd9c95)
- Use the first available tetrode as trial time (9184101)
- Add
get_LFPs
utility function to make sure LFPs are all on the same timestamps (edd89ec) - Make sure LFP data is of type float (69ea5d4)
- Interpolate position based on time between timestamps (50e06fd)
- Rework
reshape_to_segments
to use sampling frequency to get more accurate times (976f263) - Be less restrictive about the default minimum distance animal has to travel to be classified as inbound/outbound (af61471)
- Allow user to set minimum distance animal has to travel (24928cb)
- Minor formatting
v0.3.5.dev0
- Add
Animal
namedtuple as a data stucture for defining information about that animal - Catch
TypeError
in loadmat becausescipy 1.0.0
is not throwing the usualFileNotFoundError
- remove unnecessary
exit
Improved trajectory categorization
Label whole trajectories between wells instead of point by point.
Compute exposure
For the epoch dataframe, we compute the exposure instead of relying on the precomputed variable in the task matlab file. This is because it is not always computed in all datasets.
Fix package dependency for `save_xarray` function
0.2.1.dev0 Bump version
Fix path specification
0.2.0.dev0 Update version