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library(IRanges) x1 <- IntegerList(15:11, 21:28, compress=TRUE) order(x1) # IntegerList of length 2 # [[1]] 5 4 3 2 1 # [[2]] 1 2 3 4 5 6 7 8 order(x1, decreasing=TRUE) # BROKEN! # IntegerList of length 2 # [[1]] 13 12 11 10 9 # [[2]] 3 2 1 -4 -3 -2 -1 0
This in turn breaks sort( , decreasing=TRUE):
sort( , decreasing=TRUE)
sort(x1, decreasing=TRUE) # Error in seq_len(x_NROW)[i] : # only 0's may be mixed with negative subscripts
Everything looks fine with a SimpleIntegerList object:
x2 <- IntegerList(15:11, 21:28, compress=FALSE) order(x2) # IntegerList of length 2 # [[1]] 5 4 3 2 1 # [[2]] 1 2 3 4 5 6 7 8 order(x2, decreasing=TRUE) # IntegerList of length 2 # [[1]] 1 2 3 4 5 # [[2]] 8 7 6 5 4 3 2 1 sort(x2, decreasing=TRUE) # IntegerList of length 2 # [[1]] 15 14 13 12 11 # [[2]] 28 27 26 25 24 23 22 21
> sessionInfo() R version 3.6.0 Patched (2019-05-02 r76454) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 16.04.5 LTS Matrix products: default BLAS: /home/hpages/R/R-3.6.r76454/lib/libRblas.so LAPACK: /home/hpages/R/R-3.6.r76454/lib/libRlapack.so locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats4 parallel stats graphics grDevices utils datasets [8] methods base other attached packages: [1] IRanges_2.19.16 S4Vectors_0.23.23 BiocGenerics_0.31.6 loaded via a namespace (and not attached): [1] compiler_3.6.0
The text was updated successfully, but these errors were encountered:
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This in turn breaks
sort( , decreasing=TRUE)
:Everything looks fine with a SimpleIntegerList object:
sessionInfo():
The text was updated successfully, but these errors were encountered: