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26 Open 41 Closed
26 Open 41 Closed
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Issues list

depends on deprecated pkg_resources module
#112 opened Oct 16, 2024 by emollier
missing data in genotype file
#109 opened Aug 19, 2023 by snackens
Significance of the worst_pairwise_p
#108 opened Mar 7, 2023 by plasmid02
3
UnicodeDecode Error while reading traits file
#107 opened Jan 15, 2023 by arijitnus
Unrecognized character found in trait file
#105 opened Dec 11, 2022 by shaodongyan
2
Should assemblies be removed if core gene alignment shows redundancies?
#104 opened Sep 21, 2022 by chahatupreti
Stop at "Calculating max number of contrasting pairs for each nominally significant gene: in the Ternimal
#103 opened Aug 12, 2022 by Xiangyang1984
Convert vcf from parsnp to Scoary input
#98 opened Feb 25, 2022 by nicola-palmieri
Startcol error
#97 opened Feb 2, 2022 by GillNdhlovu
1
Support for non-binary traits help wanted question
#96 opened Nov 23, 2021 by MrTomRod
9
collapse flag output
#95 opened Oct 8, 2021 by jayvorn
Question about --collapse enhancement
#94 opened Jul 19, 2021 by Antonia-Chalka
2
I got the CSV files of all trait related genes. How do I get the important genes in all trait files?
#93 opened Jun 30, 2021 by 971202
Gene enrichments across host sites
#91 opened May 19, 2021 by spatz018
IndexError: list index out of range
#90 opened Apr 15, 2021 by hollygene
4
_csv.Error: field larger than field limit (131072)
#89 opened Feb 3, 2021 by ga23981
Scoary output for phandango
#88 opened Dec 3, 2020 by pavlo888
1
Scoary run in cluster MPI??? enhancement help wanted question
#83 opened Jul 6, 2020 by germant13
1
Add functionality to handle missing values in the genetic data enhancement
#75 opened Feb 25, 2019 by AdmiralenOla 1.6.17
@AdmiralenOla
Please switch to Python3
#74 opened Jan 29, 2019 by tillea 1.6.17
@AdmiralenOla
Test data are missing so test suite does not succeed
#73 opened Jan 29, 2019 by tillea
@AdmiralenOla
Don't crash when newick file has node labels bug
#72 opened Jan 24, 2019 by AdmiralenOla 1.6.17
@AdmiralenOla
2
RuntimeError: maximum recursion depth exceeded while calling a Python object bug help wanted
#69 opened Sep 19, 2018 by mlaziz 1.6.17
4
Incomplete presence/absence data from Single-cell genomes question
#66 opened Dec 22, 2017 by thackl
3
Maximum recursion depth bug
#56 opened Mar 31, 2017 by AdmiralenOla 1.6.17
@AdmiralenOla
4
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